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Illumina / canvas

Canvas - Copy number variant (CNV) calling from DNA sequencing data
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help with .NET execution #52

Closed RichardCorbett closed 7 years ago

RichardCorbett commented 7 years ago

Hi there,

I'm trying to get Canvas 1.25 working. I gather from the docs that this new version requires .NET instead of mono.

I installed the .Net Core and tried running Canvas with this command:

/opt/dotnet/shared/Microsoft.NETCore.App/1.1.2/dotnet Canvas.dll
Error: assembly specified in the dependencies manifest was not found -- package: 'combinatorics', version: '1.0.0', path: 'Combinatorics.dll'

Obfiously, I'm new to the .NET side of things. Do you have any tips? I tried searching my .NET install for the combinatorics dll, but didn't find anything. Is it part of canvas?

eroller commented 7 years ago

Are you running Canvas.dll along with all the other files from the tarball extracted? Combinatorics.dll should exist in the same directory as Canvas.dll.

RichardCorbett commented 7 years ago

Thanks for the quick reply. You are correct. I re-downloaded and now have the right rile in there. Not sure how I lost it originally. Thanks.

RichardCorbett commented 7 years ago

Up and running now.