I was trying to run hap.py with --preserve-info using vcfeval as a comparison engine, but it keeps on throwing an error about an undefined variable output_vcf. The offending line is here -- output_vcf is never defined. I tried figuring out what output_vcf could mean, but had no luck. Can anyone else help me figure this out?
I was trying to run hap.py with --preserve-info using vcfeval as a comparison engine, but it keeps on throwing an error about an undefined variable
output_vcf. The offending line is here -- output_vcf is never defined. I tried figuring out what output_vcf could mean, but had no luck. Can anyone else help me figure this out?