Illumina / interop

C++ Library to parse Illumina InterOp files
http://illumina.github.io/interop/index.html
GNU General Public License v3.0
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Legacy Phasing/Prephasing Rate #303

Closed PKazakova closed 1 year ago

PKazakova commented 1 year ago

Hello! Thanks for good software. Can you tell me please how way I can extract information about Legacy Phasing/Prephasing Rate. Unfortonately, summary by Lane doesn't work. The column with this data is missing in the output.

Index(['ReadNumber', 'IsIndex', 'Lane', 'Cluster Count', 'Cluster Count Pf',
       'Density', 'Density Pf', 'Error Rate', 'Error Rate 100',
       'Error Rate 35', 'Error Rate 50', 'Error Rate 75',
       'First Cycle Intensity', '% Aligned', '% >= Q30', '% Occupied', '% Pf',
       'Phasing', 'Phasing Offset', 'Phasing Slope', 'Prephasing',
       'Prephasing Offset', 'Prephasing Slope', 'Projected Yield G', 'Reads',
       'Reads Pf', 'Tile Count', 'Yield G'],
      dtype='object')

Best regards, Polina.

PKazakova commented 1 year ago

Oh, sorry to bother you, I understood that 'Prephasing' means 'Prephasind Rate' from SAV.