I was having trouble with running multiple samples at once (presumably a memory error), so I started running my samples individually through the workflow. I've noticed that all of my output vcfs are missing the format field and the corresponding sample field, which prevents me from merging manta output across multiple samples.
The error and warning logs are completely empty.
Am I missing something obvious that would cause this?
I was having trouble with running multiple samples at once (presumably a memory error), so I started running my samples individually through the workflow. I've noticed that all of my output vcfs are missing the format field and the corresponding sample field, which prevents me from merging manta output across multiple samples.
The error and warning logs are completely empty.
Am I missing something obvious that would cause this?
Thanks