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Illumina / strelka

Strelka2 germline and somatic small variant caller
GNU General Public License v3.0
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CONFIGURATION ERROR: #172

Open parvathisudha opened 4 years ago

parvathisudha commented 4 years ago

Hi, I am trying to configure, configureStrelkaSomaticWorkflow.py, I am getting an error Reference fasta file is missing a chromosome found in the normal BAM/CRAM file: '1'

Can you please help me here?

Thanks Parvathi.