$ make -j4 install
[ 0%] Updating buildtime config info
[ 0%] Building pyflow
[ 0%] Built target strelka_codemin
[ 0%] Built target strelka_rapidjson
*** Error compiling '/home/sm/sm/software/biosoft/bin/strelka2/strelka-2.9.10.release_src/build/redist/pyflow-1.1.20/src/pyflow.py'...
File "/home/sm/sm/software/biosoft/bin/strelka2/strelka-2.9.10.release_src/build/redist/pyflow-1.1.20/src/pyflow.py", line 791
dsfp = os.fdopen(os.open(taskDotScriptFile, os.O_WRONLY | os.O_CREAT, 0755), 'w')
^
SyntaxError: leading zeros in decimal integer literals are not permitted; use an 0o prefix for octal integers
make[2]: [redist/CMakeFiles/strelka_pyflow.dir/build.make:61: redist/pyflow-1.1.20/src/pyflow.pyc] Error 1
make[1]: [CMakeFiles/Makefile2:1471: redist/CMakeFiles/strelka_pyflow.dir/all] Error 2
make[1]: Waiting for unfinished jobs....
[ 0%] Building htslib library
[ 0%] Built target strelka_buildtime_config
[ 0%] Built target strelka_source_check
Failed to configure htslib, see /home/sm/sm/software/biosoft/bin/strelka2/strelka-2.9.10.release_src/build/redist/htslib-1.7-6-g6d2bfb7/htslib.config.error.log for details.
make[2]: [redist/CMakeFiles/strelka_samtools.dir/build.make:67: redist/htslib-1.7-6-g6d2bfb7/libhts.a] Error 1
make[1]: [CMakeFiles/Makefile2:1552: redist/CMakeFiles/strelka_samtools.dir/all] Error 2
make: [Makefile:141: all] Error 2
$ make -j4 install [ 0%] Updating buildtime config info [ 0%] Building pyflow [ 0%] Built target strelka_codemin [ 0%] Built target strelka_rapidjson *** Error compiling '/home/sm/sm/software/biosoft/bin/strelka2/strelka-2.9.10.release_src/build/redist/pyflow-1.1.20/src/pyflow.py'... File "/home/sm/sm/software/biosoft/bin/strelka2/strelka-2.9.10.release_src/build/redist/pyflow-1.1.20/src/pyflow.py", line 791 dsfp = os.fdopen(os.open(taskDotScriptFile, os.O_WRONLY | os.O_CREAT, 0755), 'w') ^ SyntaxError: leading zeros in decimal integer literals are not permitted; use an 0o prefix for octal integers
make[2]: [redist/CMakeFiles/strelka_pyflow.dir/build.make:61: redist/pyflow-1.1.20/src/pyflow.pyc] Error 1 make[1]: [CMakeFiles/Makefile2:1471: redist/CMakeFiles/strelka_pyflow.dir/all] Error 2 make[1]: Waiting for unfinished jobs.... [ 0%] Building htslib library [ 0%] Built target strelka_buildtime_config [ 0%] Built target strelka_source_check Failed to configure htslib, see /home/sm/sm/software/biosoft/bin/strelka2/strelka-2.9.10.release_src/build/redist/htslib-1.7-6-g6d2bfb7/htslib.config.error.log for details. make[2]: [redist/CMakeFiles/strelka_samtools.dir/build.make:67: redist/htslib-1.7-6-g6d2bfb7/libhts.a] Error 1 make[1]: [CMakeFiles/Makefile2:1552: redist/CMakeFiles/strelka_samtools.dir/all] Error 2 make: [Makefile:141: all] Error 2