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ImSoErgodic / py-upset

A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.
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python3.7 IndexError: GridSpec slice would result in no space allocated for subplot #32

Open GrandH2O opened 4 years ago

GrandH2O commented 4 years ago

Folloing Error: 

pyu.plot(data_dict, unique_keys = ['title'], sort_by='degree', inters_size_bounds=(20, 400))
/nextomics/Software/Base/miniconda3/lib/python3.7/site-packages/pyupset/visualisation.py:571: FutureWarning: 
.ix is deprecated. Please use
.loc for label based indexing or
.iloc for positional indexing

See the documentation here:
http://pandas.pydata.org/pandas-docs/stable/user_guide/indexing.html#ix-indexer-is-deprecated
  final_df = self.df_dict[seed].set_index(pd.Index(self.df_dict[seed][self.unique_keys])).ix[
Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/nextomics/Software/Base/miniconda3/lib/python3.7/site-packages/pyupset/visualisation.py", line 63, in plot
    upset = UpSetPlot(len(ordered_dfs), len(ordered_in_sets), additional_plots, query)
  File "/nextomics/Software/Base/miniconda3/lib/python3.7/site-packages/pyupset/visualisation.py", line 127, in __init__
    self.ax_setsize, self.ax_tablenames, self.additional_plots_axes = self._prepare_figure(additional_plots)
  File "/nextomics/Software/Base/miniconda3/lib/python3.7/site-packages/pyupset/visualisation.py", line 180, in _prepare_figure
    ax_setsize = plt.subplot(gs_top[-1:-setsize_h, 0:setsize_w])
  File "/nextomics/Software/Base/miniconda3/lib/python3.7/site-packages/matplotlib/gridspec.py", line 170, in __getitem__
    [_normalize(k1, nrows, 0), _normalize(k2, ncols, 1)],
  File "/nextomics/Software/Base/miniconda3/lib/python3.7/site-packages/matplotlib/gridspec.py", line 150, in _normalize
    raise IndexError("GridSpec slice would result in no space "
IndexError: GridSpec slice would result in no space allocated for subplot

Be like version not comptible, which version you used.