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Imageomics / Andromeda

A website that enables users to explore high-dimensional image data
http://andromeda.imageomics.org/
MIT License
2 stars 1 forks source link

Release QUEST Version by July 1, 2023 #24

Closed johnbradley closed 10 months ago

johnbradley commented 1 year ago

This will still be a beta version of the software.

johnbradley commented 1 year ago

Need method to gather data from iNaturalist dataset and merge with satellite dataset.

Each team will have an iNaturalist username. They will upload pictures to iNaturalist. Need to create computation on those pictures. Users will then add columns with their own analysis of the image. How to do the merging between satellite and iNaturalist data.

https://github.com/pyinat/pyinaturalist Earlier Andromeda notebook does some of this. Not written is merging with satellite images.

Merging by geo-coordinate overlap on a geo-coordinate range. Warn about coordinates outside of our range.

They have equipment to measure light intensity. "Use dataset on sunny days. Does it matter." They get a continuous variable for lux and temperature.

Do they repeat merging process? Yes. They could do a practice round and re-run once they have all the data.

Question: Use jupyter notebook for merging? No. A web app.

Separate from current Andromeda as a discrete step.

johnbradley commented 1 year ago

Earlier version of the data processing code. May not be the latest version. https://github.com/puddin-l/Quest_Project_2022/blob/main/Quest_Project_2022.ipynb The color processing code will not be reused from the notebook.