Investigate ingestion of HTAN related data

ImagingDataCommons / ETL

(CORE REPO)

Apache License 2.0

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Investigate ingestion of HTAN related data #45

Open fedorov opened 1 year ago

fedorov commented 1 year ago

It is currently impossible (from what I know) to figure out what data is accompanying HTAN images stored in IDC. We have image-related data for CPTAC, TCGA and other collections. I do not see reasons not to follow the same approach for HTAN. We should investigate this.

fedorov commented 1 year ago

This is also tracked in the internal issue here: https://github.com/ImagingDataCommons/IDC-ProjectManagement/issues/1562.

G-White-ISB commented 1 year ago

Added for v16. I copied clinical data from the isb-cgc BigQuery tables for only those cases we currently have in IDC