ImagingDataCommons / IDC-Tutorials

Self-guided notebook tutorials to help get started with using IDC
BSD 3-Clause "New" or "Revised" License
28 stars 14 forks source link

Fix github actions #47

Closed vkt1414 closed 9 months ago

vkt1414 commented 9 months ago

On the latest colab image, the viewer cell in getting started part 3 notebook, does not seem to receive a signal that the cell was run, at least in non-interactive mode by papermill. That's why it was getting stuck at that step. Not sure how it was running okay in the previous colab image. So I modified the preprocessing script to comment out the viewer cells.

In addition, I made several other changes

As found in the GitHub analytics repo, if a repo is inactive for 60 days, gha is disabled, but gh will send a notification to reenable the gha. However, it relies on admins and there is a legitimate chance that the notification email goes unnoticed. We need to decide if adding another step to create an empty pull request to update README.md (adding an extra space or empty line for example) 50 days after the last commit to automate this.

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