ImagingDataCommons / slim

Interoperable web-based slide microscopy viewer and annotation tool
https://imagingdatacommons.github.io/slim/
Apache License 2.0
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Measurements in Microscopy Bulk Annotations objects/ Annotation Groups #161

Open S-Streit opened 11 months ago

S-Streit commented 11 months ago

Just to reconfirm if im doing something wrong or its a bug. When writing a MSBA object with highdicom and add measurments the bulk data fetching object seems to be broken. Did not investigate further as to the point that it happens in the microscopy viewer: Right here: annotations.js:360 _fetch_measurement_indices Im not quite sure if its the coding of the object in highdicom or the PACS by Dicom4Chee (Im quite new to DICOM). I dont really know if this error belongs here but anyways just close the issue if not or if your time allows tell me what I am doing wrong.

Sorry information was a bit scarce. It is the standard slim docker configuration using Dicom4Chee as PACS system. The basic annotation comes from highdicom examples and realizes measurements as done within the examples in the documentation (See Here).

Thanks for any tips.

CPBridge commented 11 months ago

Which archive/PACS are you using? How large are the annotations? This may be a limitation of the archive

S-Streit commented 11 months ago

I updated with a bit more information

CPBridge commented 11 months ago

ok thanks, in which case this is likely a bug. We will be looking into this anyway over the next few weeks (we have also been experiencing some weirdness regarding ANN objects) and keep you posted on this thread