ImagingDataCommons / slim

Interoperable web-based slide microscopy viewer and annotation tool
https://imagingdatacommons.github.io/slim/
Apache License 2.0
118 stars 36 forks source link

ICC Color Profile #165

Open kalemohit opened 1 year ago

kalemohit commented 1 year ago

We are trying to adopt Slim into our Digital Pathology platform. Currently, we are receiving images in SVS format scanned by an Aperio 450 scanner, Fully tiled, 40X res. We convert these images into DICOM using Dicomizer and ingest them into Google's DICOM store. The images render into Slim viewer however their color seems to be off (dull and way lighter than the original image). Does anybody have any insight on how to solve this problem? Additionally, in the WSI metadata the ICC Profile value is Segue_v1, but this does not get reflected on the DCM tag 0028,2000 post conversion. Any ideas? Best, Mohit

luciorq commented 3 months ago

Hi @kalemohit,

Would you happen to have any insights into solving this problem?