ImmuneDynamics / Spectre

A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.
https://immunedynamics.github.io/spectre/
MIT License
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Error in multicut_2_segment #126

Open adriadalmau opened 2 years ago

adriadalmau commented 2 years ago

Hello everyone,

I am trying to run the Spatial-advanced workflow, but I am getting an error when running the ilastik project "multicut_2_segment". I am using windows and Ilastik 1.3.3post3. When I upload more than one .h5 file in the input data I get the following error:

You may not add more than {self._max_lanes} file(s) to this workflow.

Has anyone faced this before?

It seems to work normal when I run it only with one image. However, when I run the batch processing I get the following:

Error encountered during batch processing: wrapped C/C++ object of type AddFileButton has been deleted.

Could anyone help me please?