Implement plot, summary, print methods for 'epimodel' class

[jscott6]

Should have plotting methods for model fit objects ('epimodels'). Nice to have ability to plot reproduction number over time in particular. Could perhaps use 'Bayesplot' package.

[jscott6]

Plots added - can plot evolution of reproduction number, predicted observations and underlying infections using plot_rt(), plot_obs() and plot_infections() respectively.

[jonathanishhorowicz]

Would it be useful if these methods supported facetting? If the group argument was a vector we could facet on the groups. I have done this for the Rt plot and can add it to the others if others think it is useful.

[flaxter]

Great idea!

On Sun, 14 Jun 2020, 18:02 Jonathan Ish-Horowicz, notifications@github.com wrote:

Would it be useful if these methods supported facetting? If the group argument was a vector we could facet on the groups. I have done this for the Rt plot and can add it to the others if others think it is useful.

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[agandy]

Agreed

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Great idea!

On Sun, 14 Jun 2020, 18:02 Jonathan Ish-Horowicz, notifications@github.com wrote:

Would it be useful if these methods supported facetting? If the group argument was a vector we could facet on the groups. I have done this for the Rt plot and can add it to the others if others think it is useful.

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/ImperialCollegeLondon/epidemia/issues/5#issuecomment-643793883, or unsubscribe https://github.com/notifications/unsubscribe-auth/AAAOPW2HSGWTRG4IZLBZQ5LRWT7CJANCNFSM4N4VQWLQ .

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[jonathanishhorowicz]

I have pushed this to develop and updated the docs

[jscott6]

I have pushed this to develop and updated the docs

This looks great - thanks a lot!

[agandy]

@jscott6 - can we close this one?