Metadata of contig , like N50.

IndexThePlanet / Logan

Logan Unitigs and Contigs

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Metadata of contig , like N50. #12

Closed lkalbert001 closed 2 weeks ago

lkalbert001 commented 1 month ago

Thank you for your selfless contributions. The Logan project helps me identify introns in DNA sequences. I have a question: some contig sequences are noticeably short, such as ERR11179910.contigs.fa. Could you provide the N50 of the contig file or other assembly quality-related information for higher-quality contig data selection? Thanks.

rchikhi commented 2 weeks ago

hi, yes, good idea, added here: https://github.com/IndexThePlanet/Logan/blob/main/Stats-v1.md#detailed-statistics