Closed IndrajeetPatil closed 5 years ago
library(gamlss) #> Loading required package: splines #> Loading required package: gamlss.data #> Loading required package: gamlss.dist #> Loading required package: MASS #> Loading required package: nlme #> Loading required package: parallel #> ********** GAMLSS Version 5.1-2 ********** #> For more on GAMLSS look at http://www.gamlss.org/ #> Type gamlssNews() to see new features/changes/bug fixes. library(tidyverse) library(ggstatsplot) g <- gamlss( y ~ pb(x), sigma.fo = ~ pb(x), family = BCT, data = abdom, method = mixed(1, 20) ) #> GAMLSS-RS iteration 1: Global Deviance = 4771.925 #> GAMLSS-CG iteration 1: Global Deviance = 4771.013 #> GAMLSS-CG iteration 2: Global Deviance = 4770.994 #> GAMLSS-CG iteration 3: Global Deviance = 4770.994 broom::tidy(g, conf.int = TRUE) #> parameter term estimate std.error statistic p.value #> 1 mu (Intercept) -64.44299460 1.328921129 -48.4927158 1.889994e-210 #> 2 mu pb(x) 10.69463541 0.057769202 185.1269371 0.000000e+00 #> 3 sigma (Intercept) -2.65041283 0.108045909 -24.5304321 8.093605e-93 #> 4 sigma pb(x) -0.01002512 0.003784911 -2.6487067 8.290567e-03 #> 5 nu (Intercept) -0.10715726 0.557434072 -0.1922331 8.476237e-01 #> 6 tau (Intercept) 2.49483399 0.301271895 8.2810047 7.765827e-16 confint(g) #> Warning in vcov.gamlss(object, robust = robust): Additive terms exists in the mu formula. #> Standard errors for the linear terms maybe are not appropriate #> Warning in vcov.gamlss(object, robust = robust): Additive terms exists in the sigma formula. #> Standard errors for the linear terms maybe are not appropriate #> 2.5 % 97.5 % #> (Intercept) -67.05752 -61.82847 #> pb(x) 10.58121 10.80806 ggcoefstats(x = g) #> Note: No 95% confidence intervals available for regression coefficients from gamlss object, so skipping whiskers in the plot. #> #> Error in `levels<-`(`*tmp*`, value = as.character(levels)): factor level [2] is duplicated
Created on 2018-10-07 by the reprex package (v0.2.1)
Wait for this to be resolved on the broom-end: https://github.com/tidymodels/broom/issues/507
broom
Created on 2018-10-07 by the reprex package (v0.2.1)