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InfectionMedicineProteomics / BINN

Generating biologically informed neural networks
https://infectionmedicineproteomics.github.io/BINN/
MIT License
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Sankey plots do not work with new explain_average function #10

Closed arnscott closed 1 year ago

arnscott commented 1 year ago

The ImportanceNetwork seems to have some problems with the new output from the explain_average function. The sankey plots fail to be created from here even though an ImportanceNetwork class instance can be instantiated. This is mostly a reminder to look into this when we have time

ErikHartman commented 1 year ago

Writing a comment here so we don't forget: this has to do with the underscores in the pathway-names. In ImportanceNetwork, underscores are used as a split to get the pathway layer. This should be changed.

ErikHartman commented 1 year ago

15 Solved