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Inria-Empenn / shanoir_downloader

Scripts to download, check and anonymize datasets
GNU General Public License v3.0
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shanoir2bids can download DICOM files and locally runs dcm2niix conversion #3

Closed quentinduche closed 1 year ago

quentinduche commented 1 year ago

The user can download dicom files instead of nifti files directly using -f optiob shanoir2bids.py -f dicom. Path to the dcm2niix version, as well as specific dcm2niix options, must be defined in the s2b*.json configuration file under specific key tags. See updated s2b_example_config.json file.