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InsightSoftwareConsortium / ITKSphinxExamples

Cookbook examples for the Insight Toolkit documented with Sphinx
https://examples.itk.org
Apache License 2.0
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Create example of plugin for napari viewer #236

Open jcfr opened 3 years ago

jcfr commented 3 years ago

Anticipating the Alfa Cohort Showcase that will take place on Thursday, April 29th, 2021 from 8:00AM-1:00PM, Pacific Time (PT), it could make sense to develop a skeleton of ITK based plugin for napari viewer that would enable the use of ITK python.

Focusing on detection and segmentation of cells, nuclei, and structures, we seek to (1) establish some of the first analysis plugins for the open source napari, (2) ensure that the platform meets the needs of these tools and their users, and (3) work together to make napari the best place to build and share image analysis methods.

Relevant references:

thewtex commented 3 years ago

@ViktorvdValk has a WIP napari plugin for itk-elastix. We could add a pointer to this along with a reference "hello world" type example.