Closed ntatsisk closed 1 year ago
Patch coverage: 100.00
% and project coverage change: +3.01
:tada:
Comparison is base (
cc08680
) 88.05% compared to head (36bdf60
) 91.07%.
:mega: This organization is not using Codecov’s GitHub App Integration. We recommend you install it so Codecov can continue to function properly for your repositories. Learn more
:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Do you have feedback about the report comment? Let us know in this issue.
Thanks @thewtex, I rebased it. Let me know if I should anything else here!
Hi @thewtex, @dzenanz, it looks like the merge itself failed for macos py3.9.
In addition, do you think that it makes sense to release a new version of napari-itk-io
? So that, for example, users of elastix-napari can start using this writer
feature. Thanks.
Re-running the failed jobs for that commit did not help. The error message is:
Run GabrielBB/xvfb-action@v1
with:
run: python -m tox
env:
pythonLocation: /Users/runner/hostedtoolcache/Python/3.9.16/x64
PLATFORM: macos-latest
/Users/runner/hostedtoolcache/Python/3.9.16/x64/bin/python -m tox
py39-macos: install_deps> python -I -m pip install itk-io itk-napari-conversion napari numpy pyqt5 pytest pytest-cov pytest-qt qtpy
ERROR: THESE PACKAGES DO NOT MATCH THE HASHES FROM THE REQUIREMENTS FILE. If you have updated the package versions, please update the hashes. Otherwise, examine the package contents carefully; someone may have tampered with them.
itk-io from https://files.pythonhosted.org/packages/[2](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:2)d/9a/d66ef998dada9c4797c9b8be57a171cf01[3](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:3)61ebb1cb77699ab8306c[4](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:4)fc84/itk_io-[5](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:5).3.0-cp39-cp39-macosx_10_9_x8[6](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:6)_64.whl:
Expected sha256 888c1a58[7](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:8)e7f11796d9a6[8](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:9)0a23a713[9](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:10)29928c22daf4af216199ced181f34d8e7
Got fc62d5b67b3064d0429599f93e36804e78a14fb8076e33f7b42e66e52e3ab94f
Collecting itk-io
Downloading itk_io-5.3.0-cp39-cp39-macosx_[10](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:11)_9_x86_64.whl (24.3 MB)
━━━━━━━━━━━━━━━━━━━━━━━━ 14.7/24.3 MB 1.9 MB/s eta 0:00:06
py39-macos: exit 1 (7.51 seconds) /Users/runner/work/napari-itk-io/napari-itk-io> python -I -m pip install itk-io itk-napari-conversion napari numpy pyqt5 pytest pytest-cov pytest-qt qtpy pid=[11](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:12)22
py39-macos: FAIL code 1 (8.34 seconds)
evaluation failed :( (8.47 seconds)
::error::The process '/Users/runner/hostedtoolcache/Python/3.9.[16](https://github.com/InsightSoftwareConsortium/napari-itk-io/actions/runs/4801366500/jobs/8543472595#step:7:17)/x64/bin/python' failed with exit code 1
I guess a new update is needed. I don't know whether package releases are fully automated in this repository.
I restarted the CI -- it passed after a restart.
I tagged a new release, v0.3.0
, for deployment :tada:
@ntatsisk you should receive an invitation for permissions on the repository to create future releases.
Aims to fix https://github.com/InsightSoftwareConsortium/napari-itk-io/issues/7. It will also be helpful for the elastix-napari plugin to write the result image from the registration (https://github.com/SuperElastix/elastix_napari/tree/main).
It is pretty barebones right now. @thewtex any ideas what else should be added? Should it support writing dicoms?