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Intel-bigdata / HiBench

HiBench is a big data benchmark suite.
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Unable to run sparkbench on kerberized cluster with yarn client #702

Open dbakti7 opened 2 years ago

dbakti7 commented 2 years ago

Hi! we are able to run spark bench with hibench.spark.master set to local[*], but it doesn't work for yarn in client mode. Even after running kinit, we are getting the following error stack:

21/12/28 10:12:48 WARN Utils: Service 'SparkUI' could not bind on port 4040. Attempting port 4041.
21/12/28 10:12:49 WARN HiveConf: HiveConf of name hive.server2.http.endpoint does not exist
21/12/28 10:12:52 WARN Client: Neither spark.yarn.jars nor spark.yarn.archive is set, falling back to uploading libraries under SPARK_HOME.
Exception in thread "main" org.apache.hadoop.ipc.RemoteException(java.io.IOException): Delegation Token can be issued only with kerberos or web authentication
        at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.getDelegationToken(FSNamesystem.java:5693)
        at org.apache.hadoop.hdfs.server.namenode.NameNodeRpcServer.getDelegationToken(NameNodeRpcServer.java:730)
        at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolServerSideTranslatorPB.getDelegationToken(ClientNamenodeProtocolServerSideTranslatorPB.java:1141)
        at org.apache.hadoop.hdfs.protocol.proto.ClientNamenodeProtocolProtos$ClientNamenodeProtocol$2.callBlockingMethod(ClientNamenodeProtocolProtos.java)
        at org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:528)
        at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:1070)
        at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:999)
        at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:927)
        at java.security.AccessController.doPrivileged(Native Method)
        at javax.security.auth.Subject.doAs(Subject.java:422)
        at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1730)
        at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2915)

        at org.apache.hadoop.ipc.Client.getRpcResponse(Client.java:1511)
        at org.apache.hadoop.ipc.Client.call(Client.java:1457)
        at org.apache.hadoop.ipc.Client.call(Client.java:1367)
        at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:228)
        at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:116)
        at com.sun.proxy.$Proxy14.getDelegationToken(Unknown Source)
        at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.getDelegationToken(ClientNamenodeProtocolTranslatorPB.java:1074)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:422)
        at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:165)
        at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:157)
        at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeOnce(RetryInvocationHandler.java:95)
        at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:359)
        at com.sun.proxy.$Proxy15.getDelegationToken(Unknown Source)
        at org.apache.hadoop.hdfs.DFSClient.getDelegationToken(DFSClient.java:701)
        at org.apache.hadoop.hdfs.DistributedFileSystem.getDelegationToken(DistributedFileSystem.java:1813)
        at org.apache.hadoop.security.token.DelegationTokenIssuer.collectDelegationTokens(DelegationTokenIssuer.java:95)
        at org.apache.hadoop.security.token.DelegationTokenIssuer.addDelegationTokens(DelegationTokenIssuer.java:76)
        at org.apache.hadoop.mapreduce.security.TokenCache.obtainTokensForNamenodesInternal(TokenCache.java:143)
        at org.apache.hadoop.mapreduce.security.TokenCache.obtainTokensForNamenodesInternal(TokenCache.java:102)
        at org.apache.hadoop.mapreduce.security.TokenCache.obtainTokensForNamenodes(TokenCache.java:81)
        at org.apache.hadoop.mapred.FileOutputFormat.checkOutputSpecs(FileOutputFormat.java:126)
        at org.apache.spark.internal.io.HadoopMapRedWriteConfigUtil.assertConf(SparkHadoopWriter.scala:289)
        at org.apache.spark.internal.io.SparkHadoopWriter$.write(SparkHadoopWriter.scala:71)
        at org.apache.spark.rdd.PairRDDFunctions.$anonfun$saveAsHadoopDataset$1(PairRDDFunctions.scala:1090)
        at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
        at org.apache.spark.rdd.RDD.withScope(RDD.scala:388)
        at org.apache.spark.rdd.PairRDDFunctions.saveAsHadoopDataset(PairRDDFunctions.scala:1088)
        at org.apache.spark.rdd.PairRDDFunctions.$anonfun$saveAsHadoopFile$4(PairRDDFunctions.scala:1061)
        at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
        at org.apache.spark.rdd.RDD.withScope(RDD.scala:388)
        at org.apache.spark.rdd.PairRDDFunctions.saveAsHadoopFile(PairRDDFunctions.scala:1026)
        at org.apache.spark.rdd.PairRDDFunctions.$anonfun$saveAsHadoopFile$1(PairRDDFunctions.scala:952)
        at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
        at org.apache.spark.rdd.RDD.withScope(RDD.scala:388)
        at org.apache.spark.rdd.PairRDDFunctions.saveAsHadoopFile(PairRDDFunctions.scala:952)
        at com.intel.hibench.sparkbench.common.IOCommon.save(IOCommon.scala:64)
        at com.intel.hibench.sparkbench.common.IOCommon.save(IOCommon.scala:78)
        at com.intel.hibench.sparkbench.micro.ScalaWordCount$.main(ScalaWordCount.scala:42)
        at com.intel.hibench.sparkbench.micro.ScalaWordCount.main(ScalaWordCount.scala)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
        at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:928)
        at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
        at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
        at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
        at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1007)
        at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1016)
        at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)

Please advise on what step is needed to run hibench workload on kerberized cluster. Thank you!