How to Constructing marker genes

Irrationone / cellassign

Automated, probabilistic assignment of cell types in scRNA-seq data

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How to Constructing marker genes #47

Closed 865699871 closed 4 years ago

865699871 commented 4 years ago

entrez_map <- select(org.Hs.eg.db, as.character(rownames(holik_data$counts)), c("SYMBOL"), "ENTREZID") Error in select(org.Hs.eg.db, as.character(rownames(holik_data$counts)), : could not find function "select"

Irrationone commented 4 years ago

It doesn't look like you've loaded org.Hs.eg.db yet -- the select function is from AnnotationDbi which is imported by that package.