JDACS4C-IMPROVE / DrugCell

A visible neural network model for drug response prediction
MIT License
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DrugCell: missing preprocessing_new.py or invalid path #24

Closed wilke closed 11 months ago

wilke commented 11 months ago

python: can't open file 'preprocessing_new.py': [Errno 2] No such file or directory /usr/local/DrugCell/train.sh: line 72: ./candle_glue.sh: No such file or directory /opt/conda/lib/python3.7/site-packages/candle/parsing_utils.py:743: RuntimeWarning: These keywords used in the configuration file are not defined in CANDLE: ['cell2id', 'cross_study', 'cuda_id', 'data_model', 'data_predict', 'drug2id', 'drug_hiddens', 'eps', 'final_hiddens', 'fingerprint', 'gene2id', 'genotype', 'genotype_hiddens', 'hidden', 'improve_analysis', 'improve_data_url', 'load', 'metric', 'model_url', 'onto_file', 'original_data', 'output', 'predict_url', 'result', 'train_data_type']

wilke commented 11 months ago

Closed by #26