Closed wilke closed 1 year ago
Commands:
Output:
...
MSE improved at epoch 2; Best MSE: 0.00179358; Model: GINConvNet; Dataset: GDSC
Make prediction for 19105 samples...
Runtime: 2.8 mins
Scores:
{'total_epochs': 2, 'best_epoch': 2, 'val_loss': 0.0017935786163434386, 'pcc': 0.8193430798183505, 'scc': 0.7715892898977942, 'rmse': 0.04235066252543682, 'r2': 0.601891340527829}
IMPROVE_RESULT val_loss: 0.0017935786163434386
Finished.
Status: OK
Testing also singularity exec --bind ${TEST_DIR}:/candle_data_dir build/GraphDRP.sif train.sh 2 /candle_data_dir
Output:
Train epoch: 2 [3895680/152839 (80%)] Loss: 0.002414
Make prediction for 19105 samples...
MSE improved at epoch 2; Best MSE: 0.00179435; Model: GINConvNet; Dataset: GDSC
Make prediction for 19105 samples...
Runtime: 3.3 mins
Scores:
{'total_epochs': 2, 'best_epoch': 2, 'val_loss': 0.0017943511484190822, 'pcc': 0.8144680153400706, 'scc': 0.7711946625318125, 'rmse': 0.042359782204575626, 'r2': 0.6017198716245734}
IMPROVE_RESULT val_loss: 0.0017943511484190822
Finished.
Status: OK
Command:
train.sh 4 ./tmp
Status: