Can you please publish your python package versions

[grst]

Hi,

could you please publish the versions of the python packages you're using (e.g. using pip freeze)?

I fail to run the minimal example python train.py -i train.npz -t test.npz and I suspect that this is due to incompatible python packages.

Cheers, Gregor

btw, here is the actual error message:

venv/bin/python train.py -i ./data/train.npz -t ./data/test.npz
Loading data...

Compilation model 1

/home/sturm/repos/uni/subcellular_localization/venv/lib/python2.7/site-packages/theano/sandbox/rng_mrg.py:768: UserWarning: MRG_RandomStreams Can't determine #streams from size (Subtensor{:2:}.0), guessing 60*256
  nstreams = self.n_streams(size)
Traceback (most recent call last):
  File "train.py", line 76, in <module>
    train_fn, val_fn, network_out = neural_network(batch_size, n_hid, n_feat, n_class, lr, drop_per, drop_hid, n_filt)
  File "/home/sturm/repos/uni/subcellular_localization/model.py", line 93, in neural_network
    prediction = lasagne.layers.get_output(l_out, inputs={l_in: input_var, l_mask: mask_var}, deterministic=False)
  File "/home/sturm/repos/uni/subcellular_localization/venv/lib/python2.7/site-packages/lasagne/layers/helper.py", line 185, in get_output
    all_outputs[layer] = layer.get_output_for(layer_inputs, **kwargs)
  File "/home/sturm/repos/uni/subcellular_localization/utils.py", line 99, in get_output_for
    mask = self._srng.binomial(input_shape[:2], p=retain_prob, dtype=input.dtype)
  File "/home/sturm/repos/uni/subcellular_localization/venv/lib/python2.7/site-packages/theano/sandbox/rng_mrg.py", line 812, in binomial
    x = self.uniform(size=size, nstreams=nstreams)
  File "/home/sturm/repos/uni/subcellular_localization/venv/lib/python2.7/site-packages/theano/sandbox/rng_mrg.py", line 795, in uniform
    ndim, dtype, size))
  File "/home/sturm/repos/uni/subcellular_localization/venv/lib/python2.7/site-packages/theano/sandbox/rng_mrg.py", line 191, in new
    ndim = get_vector_length(v_size)
  File "/home/sturm/repos/uni/subcellular_localization/venv/lib/python2.7/site-packages/theano/tensor/basic.py", line 3734, in get_vector_length
    raise ValueError("length not known")
ValueError: length not known