The file "saccer3.chrom.sizes" should be named "sacCer3.chrom.sizes" [BUG]

JSuryatenggara / ChIP-AP

An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis

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The file "saccer3.chrom.sizes" should be named "sacCer3.chrom.sizes" [BUG] #8

Closed shelkmike closed 1 year ago

shelkmike commented 1 year ago

When ChIP-AP is used for Saccharomyces cerevisiae, an error happens: Please make sure GEM sacCer3 chromosome sizes reference file "sacCer3.chrom.sizes" exists

To fix this, I had to rename "saccer3.chrom.sizes" to "sacCer3.chrom.sizes" both in the folder genomes/GEM and in the folder genomes/chrom.sizes

JSuryatenggara commented 1 year ago

Sorry to be replying so late. Thank you for the bug report! We will fix the "saccer3.chrom.sizes" file name in our upcoming genome folder upload.