JTFouquier / ghost-tree

creating hybrid-gene phylogenetic trees for diversity analyses
BSD 3-Clause "New" or "Revised" License
29 stars 20 forks source link

keep current check for "g__" but if some lines don't contain it, then assume g__unidentified #54

Closed JTFouquier closed 7 years ago

JTFouquier commented 9 years ago

user report

JTFouquier commented 7 years ago

_create_taxonomy_dic in hybridtree.py should use skbio style methods to parse fasta files