JULIELab / gepi

GePI (GEne - Protein Interactions) is a web portal for quick and convenient access to gene - protein interaction mentions automatically extracted from the biomedical literature, i.e. PubMed and PubMed Central (Open Access Subset).
GNU General Public License v3.0
1 stars 0 forks source link

Add a mechanism for GePiFamplexIdAssigner to let GNP decide whether a gene should be mapped to Famplex/HGNC groups or not #191

Closed khituras closed 1 year ago

khituras commented 1 year ago

For some rather clear cases like 'NFkappaB' its rather straightforward to map it to FamPlex. However, p53 or IL-1 are also FamPlex concepts gut have a regular gene ID. Add a list of expressions to GePiFamplexIdAssigner that should still check whether GNP thinkgs that the respective mention is a FamilyName or a concrete gene.