Generate contact maps for PDB files. Use this script as reference. Resources for contact map explorer and mdtraj. Currently, PDB files outputted by ColabFold are in batches, with the top level directory being the batch number and all files from all complexes in the directory being in the batch.
Generate contact maps for PDB files. Use this script as reference. Resources for contact map explorer and mdtraj. Currently, PDB files outputted by ColabFold are in batches, with the top level directory being the batch number and all files from all complexes in the directory being in the batch.