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James-Yu / LaTeX-Workshop

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Xelatex build error with the single xe->bib->xe->xe recipe command #2440

Closed karimmd closed 3 years ago

karimmd commented 3 years ago

Preliminary questions [Required]

Disable all the other extensions except for LaTeX Workshop, and check that you still see this issue. [Required]

You still see this issue?: Yes

Make sure to visit the wiki FAQ before filling an issue.

You visited the wiki?: Yes

If your issue is with compiling a document (not having to do with finding the root file of a project), check first that you can compile manually.

You can compile a TeX document manually?: Yes

I am also using Sublime Text 3 with latextool.

Describe the bug [Required]

To Reproduce

Steps to reproduce the behavior:

  1. Go to '...'
  2. Click on '....'
  3. See error

Expected behavior

A clear and concise description of what you expected to happen.

I am expecting to initiate a single recipe that would compile without any interruptions. In other format like: IEEE trans, it works out of the box using pdf->bib->pdf->pdf.

A clear and concise description of what the bug is. Hi, I am having problem compiling my thesis that is initially downloaded from Here. I am not sure whether it is a bug or not. Most likely it can be the latex formatting issue from the styling format that I am using. But then my question, why it works within a single command when I am running the same file under SublimeText but it does not happenning within vscode. I do not have issue compiling other format like IEEE trans, elsevier. However, I did face similar issue like the above while trying to compile acm class. The main problem lies dealing with the bib/bibtex (most probably, my guess).

I am using the following recipe to build and compile

        {
            "name": "xelatex",
            "command": "xelatex",
            "args": [
                "-synctex=1",
                "-interaction=nonstopmode",
                "-file-line-error",
                "%DOCFILE%"
            ]
        },

        {
            "name": "xe->bib->xe->xe",
            "tools": [
                "xelatex",
                "bibtex",
                "xelatex",
                "xelatex"
            ]
        },
        {
            "name": "xe->xe",
            "tools": [
                "xelatex",
                "xelatex"
            ]
        },
        {
            "name": "xelatex",
            "tools": [
                "xelatex"
            ]
        }

The weird part to me is that: If I use the latextool from within sublime text 3, it works out of the box with the necessary citation and other things like figures, tables. However, when it comes to build (or compile inside vscode) then it does not work within a single command (or recipe). The technique that I use to make it work is that:

Step 1: xe->bib->xe->xe (The build process stops after issues warnings) Step 2: xe->xe (The build finally success)

Most likely the problem is happening due to the management of bibtex (*.bib). (Step-1 ) The PDF generates though as Output successfully but the Reference Section does not shows up and in the text it shows [?] before the sentence. But I am still not sure what causes the problem and how can I find a single recipe that would work out of the box with a single command.

I have tried to combine the above two builds using xe->bib->xe->xe-xe->xe but still the interruptions happen. Any advice or ideas on recipe customization would be really appreciated from the community.

Logs [Required]

Please paste the whole log messages here, not parts of ones. The log should start with Initializing LaTeX Workshop. It is very important to identify problems.

LaTeX Workshop Output [Required]

Step 1: xe->bib->xe->xe (The built process interrupted) (477 warnings, 16 infos)

[20:08:48] Initializing LaTeX Workshop.
[20:08:48] Extension root: /home/user1/.vscode/extensions/james-yu.latex-workshop-8.15.0
[20:08:48] Creating PDF file watcher.
[20:08:48] Creating LaTeX Workshop http and websocket server.
[20:08:49] LaTeX Workshop initialized.
[20:08:49] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:08:49] Current workspaceRootDir: /home/user1/latex-issue
[20:08:49] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:08:49] Root file changed: from undefined to /home/user1/latex-issue/Thesis.tex
[20:08:49] Start to find all dependencies.
[20:08:49] Root file languageId: latex
[20:08:49] Instantiating a new file watcher for /home/user1/latex-issue/Thesis.tex
[20:08:49] Creating Bib file watcher.
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/Thesis.tex
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/abstract.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/abstract.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/abbreviation.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/abbreviation.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/introduction.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/introduction.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/background.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/background.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/1st-project-A.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/1st-project-A.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/1st-project-B.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/1st-project-B.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/2nd-project.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/2nd-project.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/3rd-project.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/3rd-project.fls
[20:08:49] Parsing a file and its subfiles: /home/user1/latex-issue/chapters/conclusion.tex
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/chapters/conclusion.fls
[20:08:49] Found .bib file: /home/user1/latex-issue/RefThesis.bib
[20:08:49] Added to bib file watcher: /home/user1/latex-issue/RefThesis.bib
[20:08:49] Parsing .bib entries from /home/user1/latex-issue/RefThesis.bib
[20:08:49] Parse fls file.
[20:08:49] Cannot find fls file: /home/user1/latex-issue/Thesis.fls
[20:08:49] Server created on 127.0.0.1:33587
[20:08:49] Added to file watcher: /home/user1/latex-issue/Thesis.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/abstract.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/abbreviation.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/introduction.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/background.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/1st-project-A.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/1st-project-B.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/2nd-project.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/3rd-project.tex
[20:08:49] Added to file watcher: /home/user1/latex-issue/chapters/conclusion.tex
[20:08:49] Snippet data loaded.
[20:08:49] LaTeX Workshop version: 8.15.0
[20:08:49] Parsed 314 bib entries from /home/user1/latex-issue/RefThesis.bib.
[20:08:56] LOG command invoked: default
[20:08:58] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:08:58] Current workspaceRootDir: /home/user1/latex-issue
[20:08:58] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:08:58] Keep using the same root file: /home/user1/latex-issue/Thesis.tex
[20:09:01] RECIPES command invoked.
[20:09:03] BUILD command invoked.
[20:09:03] The document of the active editor: file:///home/user1/latex-issue/Thesis.tex
[20:09:03] The languageId of the document: latex
[20:09:03] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:09:03] Current workspaceRootDir: /home/user1/latex-issue
[20:09:03] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:09:03] Keep using the same root file: /home/user1/latex-issue/Thesis.tex
[20:09:03] Building root file: /home/user1/latex-issue/Thesis.tex
[20:09:03] Build root file /home/user1/latex-issue/Thesis.tex
[20:09:03] Recipe step 1: xelatex, -synctex=1,-interaction=nonstopmode,-file-line-error,Thesis
[20:09:03] Recipe step env: undefined
[20:09:03] cwd: /home/user1/latex-issue
[20:09:03] LaTeX build process spawned. PID: 66808.
[20:09:17] LaTeX log parsed with 492 messages.
[20:09:17] A step in recipe finished. PID: 66808.
[20:09:17] Recipe step 2: bibtex, Thesis
[20:09:17] Recipe step env: undefined
[20:09:17] cwd: /home/user1/latex-issue
[20:09:17] LaTeX build process spawned. PID: 66908.
[20:09:17] Recipe returns with error: 2/null. PID: 66908. message: .
[20:09:17] The environment variable $PATH: /usr/local/texlive/2020/bin/x86_64-linux:/home/user1/.bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
[20:09:17] The environment variable $SHELL: /bin/bash
[20:09:17] Cleaning auxiliary files and retrying build after toolchain error.
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.aux
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.blg
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.bbl
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.lof
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.lot
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.toc
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.log
[20:09:17] File cleaned: /home/user1/latex-issue/Thesis.out
[20:09:17] Recipe step 1: xelatex, -synctex=1,-interaction=nonstopmode,-file-line-error,Thesis
[20:09:17] Recipe step env: undefined
[20:09:17] cwd: /home/user1/latex-issue
[20:09:17] LaTeX build process spawned. PID: 66909.
[20:09:30] LaTeX log parsed with 493 messages.
[20:09:30] A step in recipe finished. PID: 66909.
[20:09:30] Recipe step 2: bibtex, Thesis
[20:09:30] Recipe step env: undefined
[20:09:30] cwd: /home/user1/latex-issue
[20:09:30] LaTeX build process spawned. PID: 66986.
[20:09:30] Recipe returns with error: 2/null. PID: 66986. message: .
[20:09:30] The environment variable $PATH: /usr/local/texlive/2020/bin/x86_64-linux:/home/user1/.bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
[20:09:30] The environment variable $SHELL: /bin/bash

Step 2: xe->xe (build successes) 8 warnings 24 infos

[20:11:34] LOG command invoked: compiler
[20:11:34] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:11:34] Current workspaceRootDir: /home/user1/latex-issue
[20:11:34] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:11:34] Keep using the same root file: /home/user1/latex-issue/Thesis.tex
[20:12:19] LOG command invoked: default
[20:12:19] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:12:19] Current workspaceRootDir: /home/user1/latex-issue
[20:12:19] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:12:19] Keep using the same root file: /home/user1/latex-issue/Thesis.tex
[20:12:26] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:12:26] Current workspaceRootDir: /home/user1/latex-issue
[20:12:26] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:12:26] Keep using the same root file: /home/user1/latex-issue/Thesis.tex
[20:14:45] LOG command invoked: default
[20:14:47] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:14:47] Current workspaceRootDir: /home/user1/latex-issue
[20:14:47] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:14:47] Keep using the same root file: /home/user1/latex-issue/Thesis.tex
[20:15:35] RECIPES command invoked.
[20:15:39] BUILD command invoked.
[20:15:39] The document of the active editor: file:///home/user1/latex-issue/Thesis.tex
[20:15:39] The languageId of the document: latex
[20:15:39] Current workspace folders: ["file:///home/user1/latex-issue"]
[20:15:39] Current workspaceRootDir: /home/user1/latex-issue
[20:15:39] Found root file from active editor: /home/user1/latex-issue/Thesis.tex
[20:15:39] Keep using the same root file: /home/user1/latex-issue/Thesis.tex
[20:15:39] Building root file: /home/user1/latex-issue/Thesis.tex
[20:15:39] Build root file /home/user1/latex-issue/Thesis.tex
[20:15:39] Recipe step 1: xelatex, -synctex=1,-interaction=nonstopmode,-file-line-error,Thesis
[20:15:39] Recipe step env: undefined
[20:15:39] cwd: /home/user1/latex-issue
[20:15:39] LaTeX build process spawned. PID: 68625.
[20:15:52] LaTeX log parsed with 435 messages.
[20:15:52] A step in recipe finished. PID: 68625.
[20:15:52] Recipe step 2: xelatex, -synctex=1,-interaction=nonstopmode,-file-line-error,Thesis
[20:15:52] Recipe step env: undefined
[20:15:52] cwd: /home/user1/latex-issue
[20:15:52] LaTeX build process spawned. PID: 68703.
[20:16:07] LaTeX log parsed with 32 messages.
[20:16:07] Recipe of length 2 finished. PID: 68703.
[20:16:07] Successfully built /home/user1/latex-issue/Thesis.tex.
[20:16:07] No PDF viewer connected for /home/user1/latex-issue/Thesis.pdf
[20:16:07] Parse fls file.
[20:16:07] Cannot find fls file: /home/user1/latex-issue/Thesis.fls

To access the log, click the 'TeX' icon on the Activity Bar on the left side, select 'View Log Messages', then select 'View LaTeX Workshop extension log'.

[Paste the log here]

Step 1: xe->bib->xe->xe (The built process interrupted) (477 warnings, 16 infos)

This is BibTeX, Version 0.99d (TeX Live 2020)
The top-level auxiliary file: Thesis.aux
The style file: GBT7714-2005NLang.bst
Database file #1: RefThesis.bib
Warning--entry type for "uppal2010openflow" isn't style-file defined
--line 743 of file RefThesis.bib
Repeated entry---line 2318 of file RefThesis.bib
 : @article{yaqoob2017overcoming
 :                              ,
I'm skipping whatever remains of this entry
Repeated entry---line 2340 of file RefThesis.bib
 : @article{chahal2019network
 :                           ,
I'm skipping whatever remains of this entry
Repeated entry---line 2363 of file RefThesis.bib
 : @article{sadio2019design
 :                         ,
I'm skipping whatever remains of this entry
Repeated entry---line 2373 of file RefThesis.bib
 : @article{luo2019software
 :                         ,
I'm skipping whatever remains of this entry
Warning--entry type for "zheng2011t-drive" isn't style-file defined
--line 2472 of file RefThesis.bib
Repeated entry---line 2573 of file RefThesis.bib
 : @article{zhang2014named
 :                        ,
I'm skipping whatever remains of this entry
Repeated entry---line 2591 of file RefThesis.bib
 : @article{farris2018survey
 :                          ,
I'm skipping whatever remains of this entry
Repeated entry---line 2865 of file RefThesis.bib
 : @misc{ndn-tlv-web
 :                  ,
I'm skipping whatever remains of this entry
Repeated entry---line 2882 of file RefThesis.bib
 : @article{mastorakis2017evolution
 :                                 ,
I'm skipping whatever remains of this entry
Repeated entry---line 2958 of file RefThesis.bib
 : @article{jmal2017openflow
 :                          ,
I'm skipping whatever remains of this entry
-- IEEEtran.bst version 1.14 (2015/08/26) by Michael Shell.
-- http://www.michaelshell.org/tex/ieeetran/bibtex/
-- See the "IEEEtran_bst_HOWTO.pdf" manual for usage information.
Warning--missing institution in Cai2011
Warning--empty booktitle in HassasYeganeh2012
Warning--empty journal in Ferguson2013
Warning--empty booktitle in Yeganeh2014
Warning--empty journal in Biswas_2020a
Warning--empty journal in Biswas_2020b
Too many commas in name 1 of "Luis Sequeira, Juan Luis de la Cruz, Jose Ruiz-Mas, Jose Saldana, Julian Fernandez-Navajas, Jose Luis Almodovar" for entry web-odin-wi5
while executing---line 2403 of file GBT7714-2005NLang.bst
Too many commas in name 1 of "Luis Sequeira, Juan Luis de la Cruz, Jose Ruiz-Mas, Jose Saldana, Julian Fernandez-Navajas, Jose Luis Almodovar" for entry web-odin-wi5
while executing---line 2403 of file GBT7714-2005NLang.bst
Too many commas in name 1 of "Luis Sequeira, Juan Luis de la Cruz, Jose Ruiz-Mas, Jose Saldana, Julian Fernandez-Navajas, Jose Luis Almodovar" for entry web-odin-wi5
while executing---line 2403 of file GBT7714-2005NLang.bst
Too many commas in name 1 of "Emmanuel Baccelli, Oliver Hahm, Mesut Gunes, Matthias Wahlisch, Thomas C. Schmidt" for entry web-riot-os
while executing---line 2403 of file GBT7714-2005NLang.bst
Too many commas in name 1 of "Emmanuel Baccelli, Oliver Hahm, Mesut Gunes, Matthias Wahlisch, Thomas C. Schmidt" for entry web-riot-os
while executing---line 2403 of file GBT7714-2005NLang.bst
Warning--empty author in 5g_ppp_paper
Warning--empty author in etsi.23.501

Done.
(There were 14 error messages)

Step 2: xe->xe (Builds successfully) 8 warnings 24 infos

This is XeTeX, Version 3.14159265-2.6-0.999992 (TeX Live 2020) (preloaded format=xelatex)
 restricted \write18 enabled.
entering extended mode
(./Thesis.tex
LaTeX2e <2020-10-01> patch level 2
L3 programming layer <2020-10-27> xparse <2020-03-03> (./BIT-thesis-grd.cls (/usr/local/texlive/2020/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/local/texlive/2020/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/local/texlive/2020/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/local/texlive/2020/texmf-dist/tex/latex/amscls/amsthm.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/amsfonts/amsfonts.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/amsfonts/amssymb.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/tools/bm.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/jknapltx/mathrsfs.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/was/upgreek.sty)
Document Class: BIT-thesis-grd 2018/03/25 v1.2 BIT-thesis-grd document class
(/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/ctexbook.cls (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/config/ctexbackend.cfg) (/usr/local/texlive/2020/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/l3backend/l3backend-xetex.def))
Document Class: ctexbook 2020/10/19 v2.5.5 Chinese adapter for class book (CTEX)
(/usr/local/texlive/2020/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/l3packages/xparse/xparse-generic.tex)) (/usr/local/texlive/2020/texmf-dist/tex/latex/l3packages/l3keys2e/l3keys2e.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/ctexhook.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/ctexpatch.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/base/fix-cm.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/base/ts1enc.def)) (/usr/local/texlive/2020/texmf-dist/tex/latex/ms/everysel.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/config/ctexopts.cfg) (/usr/local/texlive/2020/texmf-dist/tex/latex/base/book.cls
Document Class: book 2020/04/10 v1.4m Standard LaTeX document class
(/usr/local/texlive/2020/texmf-dist/tex/latex/base/bk12.clo)) (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/engine/ctex-engine-xetex.def (/usr/local/texlive/2020/texmf-dist/tex/xelatex/xecjk/xeCJK.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/l3packages/xtemplate/xtemplate.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/fontspec/fontspec.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/base/fontenc.sty) (/usr/local/texlive/2020/texmf-dist/tex/latex/fontspec/fontspec.cfg))) (/usr/local/texlive/2020/texmf-dist/tex/xelatex/xecjk/xeCJK.cfg))) (/usr/local/texlive/2020/texmf-dist/tex/latex/zhnumber/zhnumber.sty (/usr/local/texlive/2020/texmf-dist/tex/latex/zhnumber/zhnumber-utf8.cfg)) (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/scheme/ctex-scheme-chinese-book.def (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/config/ctex-name-utf8.cfg)) (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/ctex-cs4size.clo) (/usr/local/texlive/2020/texmf-dist/tex/latex/ctex/fontset/ctex-fontset-fandol.def

Package fontspec Warning: Font "FandolSong-Regular" does not contain requested
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tamuratak commented 3 years ago

The issue is not related to the extension. You should fix each error in the output of bibtex. Please ask at https://tex.stackexchange.com/

jlelong commented 3 years ago

You have errors in your .bib, which make bibtex fails and therefore the following steps of the recipe are not run. Fix them and your recipe will work xe->bib->xe->xe. See #1170 for defining a latexmk recipe using xelatex.