[x] MatrixSNPUnphased: SNP calldata matrix (unphased).
[x] outer_indices: (p+1,) array indicating the starting index into inner_indices that grabs the corresponding non-zero indices. The last entry should be length of inner_indices.
[x] inner_indices: (I,) array where inner_indices[outer_indices[i]:outer_indices[i+1]] is the ith column non-zero indices.
[x] values : (I,) array where values[outer_indices[i]:outer_indices[i+1]] is the ith column non-zero values.
[ ] MatrixSNPPhased: SNP calldata matrix (phased).
MatrixSNPUnphased
: SNP calldata matrix (unphased).outer_indices
: (p+1,) array indicating the starting index intoinner_indices
that grabs the corresponding non-zero indices. The last entry should be length ofinner_indices
.inner_indices
: (I,) array whereinner_indices[outer_indices[i]:outer_indices[i+1]]
is the ith column non-zero indices.values
: (I,) array wherevalues[outer_indices[i]:outer_indices[i+1]]
is the ith column non-zero values.MatrixSNPPhased
: SNP calldata matrix (phased).outer_indices_1
outer_indices_2
inner_indices_1
inner_indices_2
MatrixSNPAncestryUnphased
MatrixSNPAncestryPhased