rhayes777
commented
1 year ago Hi Sam,
Thanks for raising this issue. We haven't officially provided support for Python 3.11 yet. Could you try with Python 3.10 for now? We're hoping to provide 3.11 support soon.
On Sun, 27 Aug 2023, 20:28 Sam Jackson, @.***> wrote:
Hi, I'm having trouble trying to install autolens on my mac (OS ventura 13.4), I'm installing via conda.
Python versions 3.11
When doing pip install autolens...
I get this error:
`Collecting PyYAML==5.4.1 (from autoconf==2023.7.5.2->autolens) Using cached PyYAML-5.4.1.tar.gz (175 kB) Installing build dependencies ... done Getting requirements to build wheel ... error error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully. │ exit code: 1 ╰─> [68 lines of output] /private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in setup.cfg !!
******************************************************************************** The license_file parameter is deprecated, use license_files instead. By 2023-Oct-30, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ********************************************************************************!! parsed = self.parsers.get(option_name, lambda x: x)(value) running egg_info writing lib3/PyYAML.egg-info/PKG-INFO writing dependency_links to lib3/PyYAML.egg-info/dependency_links.txt writing top-level names to lib3/PyYAML.egg-info/top_level.txt Traceback (most recent call last): File "/Users/sam/anaconda3/envs/autolens/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in
main() File "/Users/sam/anaconda3/envs/autolens/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main json_out['return_val'] = hook(hook_input['kwargs']) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/Users/sam/anaconda3/envs/autolens/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 118, in get_requires_for_build_wheel return hook(config_settings) ^^^^^^^^^^^^^^^^^^^^^ File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 355, in get_requires_for_build_wheel return self._get_build_requires(config_settings, requirements=['wheel']) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 325, in _get_build_requires self.run_setup() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 341, in run_setup exec(code, locals()) File " ", line 271, in attrs) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup return run_commands(dist) ^^^^^^^^^^^^^^^^^^ File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands dist.run_commands() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands self.run_command(cmd) File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 1233, in run_command super().run_command(command) File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command cmd_obj.run() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 319, in run self.find_sources() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 327, in find_sources mm.run() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 549, in run self.add_defaults() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 587, in add_defaults sdist.add_defaults(self) File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/command/sdist.py", line 113, in add_defaults super().add_defaults() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/_distutils/command/sdist.py", line 251, in add_defaults self._add_defaults_ext() File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/_distutils/command/sdist.py", line 336, in _add_defaults_ext self.filelist.extend(build_ext.get_source_files()) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/init.py", line 107, in setup return distutils.core.setup( ", line 201, in get_source_files File "/private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 107, in getattr raise AttributeError(attr) AttributeError: cython_sources [end of output] note: This error originates from a subprocess, and is likely not a problem with pip. error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully. │ exit code: 1 ╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip. `
I think this is a problem with PyYAML version 5.4.1. It seems widely documented issue and they suggest using 5.3...
I suspect, as also stated in the issue below, PyYAML needs to be version 6 to be compatible with Python 3.10 and 3.11.
yaml/pyyaml#724 https://github.com/yaml/pyyaml/issues/724
— Reply to this email directly, view it on GitHub https://github.com/Jammy2211/autolens_workspace/issues/16, or unsubscribe https://github.com/notifications/unsubscribe-auth/ABQRGMR3GDV5PL4FZJVAKKDXXONVRANCNFSM6AAAAAA4AQFAAM . You are receiving this because you are subscribed to this thread.Message ID: @.***>
skcajs
Hi, I'm having trouble trying to install autolens on my mac (OS ventura 13.4), I'm installing via conda.
Python versions 3.11
When doing pip install autolens...
I get this error:
`
Collecting PyYAML==5.4.1 (from autoconf==2023.7.5.2->autolens) Using cached PyYAML-5.4.1.tar.gz (175 kB) Installing build dependencies ... done Getting requirements to build wheel ... error error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully. │ exit code: 1 ╰─> [68 lines of output] /private/var/folders/wn/sgq3s3995f376l6s7qtqsnqw0000gn/T/pip-build-env-tgni6t47/overlay/lib/python3.11/site-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in
setup.cfg!!note: This error originates from a subprocess, and is likely not a problem with pip. error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully. │ exit code: 1 ╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip. `
I think this is a problem with PyYAML version 5.4.1. It seems widely documented issue and they suggest using 5.3...
I suspect, as also stated in the issue below, PyYAML needs to be version 6 to be compatible with Python 3.10 and 3.11.
https://github.com/yaml/pyyaml/issues/724