Janelia-Trackathon-2023 / traccuracy

Utilities for computing common accuracy metrics on cell tracking challenge solutions with ground truth

https://traccuracy.readthedocs.io

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Eliminate copy of graph objects to improve memory utilization #166

Open msschwartz21 opened 2 weeks ago

msschwartz21 commented 2 weeks ago

There are at least two places where we create copies of the TrackingGraph:

At the initialization of the Matcher
When correcting shifted divisions

We should eliminate both of these instances. The first is easy, but the second may require more thought since we are essentially putting duplicate labels on the graph.

msschwartz21 commented 14 hours ago

74 eliminated the copy of the graph that was created by the matcher, but copies are still created during correcting division frame shift errors.