Closed kgabor closed 1 year ago
In a 1-machine setup, the fatjar works for me with spark-submit
, with the ancient gson
version problem inherited from spark-2.4.7
. Needs @trautmane 's workaround. (https://github.com/PreibischLab/BigStitcher-Spark/issues/11)
@trautmane - could you please check this out?
Excluding ijp-kheops bioformats from multiview-reconstruction makes total sense, only required for OpenSeaDragon export ...
Note: I'll also make a new branch that uses the newest multiview-reconstruction 3.2.2 since it contains most of the code required in this spark-project ... I pushed everything upstream, also optimizing it at the same time
@StephanPreibisch Thanks for merging these changes. I'm closing this PR then. When do you plan to merge overhaul-mvr-322
into main
?
I wanted to try upgrading Spark to 3.3.2 (this is the version run by Amazon EMR serverless).
Superseded by #17.