JaneliaSciComp / BigStitcher-Spark

Running compute-intense parts of BigStitcher distributed
BSD 2-Clause "Simplified" License
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Fused images are blank?? #34

Open Elsword016 opened 1 month ago

Elsword016 commented 1 month ago

I tried the example stitching dataset that was linked in the README. But in the end, I am getting blank images:

ss

cmd used: ./affine-fusion -x ~/stitching_ex/dataset.xml -o ~/stitching_ex/fused.zarr -d /ch0/s0 -s ZARR --multiRes --preserveAnisotropy --UINT8 --minIntensity 0 --maxIntensity 255 --channelId 0

I installed it in Ubuntu in wsl2 with maven version, am I missing any dependency??

Apache Maven 3.8.7
Maven home: /usr/share/maven
Java version: 11.0.23, vendor: Ubuntu, runtime: /usr/lib/jvm/java-11-openjdk-amd64
Default locale: en, platform encoding: UTF-8
OS name: "linux", version: "5.15.153.1-microsoft-standard-wsl2", arch: "amd64", family: "UNIX"