Make a function that aggregates A matrices

JanetMatsen / bacteriopop

population dynamics for abundances calculated from meta-omics sequencing

Apache License 2.0

1 stars 3 forks source link

Make a function that aggregates A matrices #10

Closed JanetMatsen closed 8 years ago

JanetMatsen commented 8 years ago

Aggregate the A matrices as Pearl's diagrams shows.

We can use the (not yet implemented) seaborn heatmap function.

Saghar-Hosseini commented 8 years ago

I am concatenating the data frame since they have different dimensions across the replicates, and then use groupby to calculate their mean and STD. For the SNR (Mean/STD) I'm using a simple division.