Open AminaLEM opened 2 years ago
Hello,
I suggest reading section 5.2 in the Nm-nano paper about Benchmark datasets generation as precise reference for Nm labels.
Thanks,
Best regards, Doaa
On Wed, Jan 5, 2022 at 9:47 AM Amina LEM @.***> wrote:
Hello,
Could you precise the reference for Nm labels that you used in your paper? To my knowledge, research in RNA modifications detection presents inconsistent results (different techniques identify different sets of modified positions)...
Thanks,
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Hello again,
My question is about the Nm bed file. How to get that?
Thanks,
TheBED file was imported from Epitomy (https://epitomy.soic.iupui.edu/ ), a gold standard RNA modification database that is used to search for locations of modifications.
On Fri, Jan 7, 2022 at 5:02 AM Amina LEM @.***> wrote:
Hello again,
My question is about the Nm bed file. How to get that?
Thanks,
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Hello,
Thank you.
Amina
Hello,
Could you precise the reference for Nm labels that you used in your paper? To my knowledge, research in RNA modifications detection presents inconsistent results (different techniques identify different sets of modified positions)...
Thanks,