JasperBoom / caltha

A python package to process UMI tagged mixed amplicon metabarcoding data.
GNU Affero General Public License v3.0
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Add a UMI block count analysis. #9

Open JasperBoom opened 4 years ago

JasperBoom commented 4 years ago

For every block in a UMI, count the occurrence of the 256 possible block variations. Output x number of block lists, one for every UMI block present.

Make sure to add a input for the user, number of blocks needs to be specified.

JasperBoom commented 4 years ago

Also add a input for the user to specify the spacer size between the UMI blocks.