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JenniNiku / gllvm

Generalized Linear Latent Variable Models
https://jenniniku.github.io/gllvm/
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Bugfixes #69

Closed BertvanderVeen closed 2 years ago

BertvanderVeen commented 2 years ago

I will use this branch to fix problems from the merge conflict, please leave it open for now.

BertvanderVeen commented 2 years ago

Note that for the sd.errors of species loadings to work in ordiplot for the quadratic model, we need to access the covariance matrix from the delta method and get them separately. These do not incorporate model$params$sigma.lv so it will get messy quite quickly. For that to work, I might have to rework them completely.