JensUweUlrich / ReadBouncer

Fast and scalable nanopore adaptive sampling
GNU General Public License v3.0
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failed to connect to all addresses #63

Closed kcleal closed 1 year ago

kcleal commented 1 year ago

Hi, Im having trouble connecting to Minknow (on my local machine) and get this log message:

-1.2.2-Linux/bin/ReadBouncer --config config.16p1_21q.toml
IBF-build processed 2 sequences (0.000134 Mbp) in 0.00407432 seconds (29.4528 Kseq/m, 1.97333 Mbp/m)
 - 2 sequences in 2 bins were written to the IBF
Trying to connect to MinKNOW
Host : localhost
Port : 9502
Connecting to MinKNOW using the token: 44c5fc5d-f61b-4b1a-a00f-114bdbc6d90b
failed to connect to all addresses
Real time : 0.0420797 sec
CPU time  : 0.030172 sec
Peak RSS  : 31 MByte

Is the token wrong? I tried using port 9504, but no luck. Im using Minkow GUI 5.3.6, ReadBouncer 1.2.2, ubuntu.

Thanks!

JensUweUlrich commented 1 year ago

Hi @kcleal

To which device/flowcell are you trying to connect? Did you setup a simulated device in MinKNOW?

kcleal commented 1 year ago

It was a minion mk1b. It was using an old flow cell in live mode

JensUweUlrich commented 1 year ago

Did you check that the name of that flowcell was correctly specified in the config.TOML file?

kcleal commented 1 year ago

I think so, but I will double check when I get back into the office tomorrow. Thanks for the help!

kcleal commented 1 year ago

Sorry I think I was using the wrong name. The 'Position' appears to work but not the 'Flow cell ID'

Screenshot from 2022-12-16 13-44-04