JetBrains-Research / jbr

JBR Genome Browser
https://doi.org/10.1093/bioinformatics/btab376
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New BED colouring option for scores that are pvalues #186

Open iromeo opened 1 year ago

iromeo commented 1 year ago

For tracks with pvalues - the less value, the better, so most confident peaks will be transparent + we interested in -log(pvalue). Let's support:

otherwise we have to always update the track and add some log columns into it.

iromeo commented 10 months ago

E.g. could be used for https://github.com/JetBrains-Research/jbr/issues/251 feature & coloring that makes best pvalues visible, not transparent