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JetBrains-Research / jbr

JBR Genome Browser
https://doi.org/10.1093/bioinformatics/btab376
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Add summarised by location type tracks #46

Open iromeo opened 7 years ago

iromeo commented 7 years ago

Add summarised by location type tracks. E.g. for additive bigWig data (peaks) we can summarise peaks not by fixed bins, but by CCI, promoters, ChromHMM states. I suggest to implement it like Arithmetic tracks

iromeo commented 7 years ago

Supported for BED and CGIs, GTF support not implemented.

GTF support is important, because it's easy to generate custom GTF-based annotations from GTF genes annotations + modify to leave promoters, gene body, utrs, etc.