JetBrains-Research / snakecharm

Plugin for PyCharm / IntelliJ IDEA Platform IDEs which adds support for Snakemake language.

MIT License

61 stars 7 forks source link

Closed dakochik closed 2 years ago

dakochik commented 2 years ago

341 Inspection was implemented.

iromeo commented 2 years ago

Seems same could be true for not only for rule/checkpoint, but for subworkflow/use sections. Please investigate it

dakochik commented 2 years ago

Investigation about subworkflow/use cases:

Got a RE when I added a docstring in use rule. In other cases docstrings are inherited from rules parents.
There are no docstring element in subworkflow when I run snakemake with --print-compilation. Also, I tried workflow.subworkflows and then call docstring of list's elements. I got the following error: 'Subworkflow' object has no attribute 'docstring'.

So, looks like this inspection can't be applied to subworkflow/use.