How to do GWAS with CNVcaller results?

JiangYuLab / CNVcaller

GNU General Public License v3.0

41 stars 14 forks source link

How to do GWAS with CNVcaller results? #13

Open MaoSihong opened 3 years ago

MaoSihong commented 3 years ago

I've met an issue that to do GWAS with CNVcaller results. My samples' numeric pheon dont have classic case/control differentiation, and I have no idea to transformed genotype to a similar biallelic geno data. Says, I cant make to finish assoc analysis with a proper software. I need some help.

MaoSihong commented 3 years ago

I'm trying to finish the job with plink common CNV analysis function.