Thank you for development ASEP for studying ASE using RNA-seq data in the absence of phased variant information. I noticed that you mentioned ASEP can work with population-level data. So, if I have some data with an abnormal background, for example, from crosses between homozygous parents in mice, with three replicates in both treatment and control groups, would ASEP still be applicable?
Hi,
Thank you for development ASEP for studying ASE using RNA-seq data in the absence of phased variant information. I noticed that you mentioned ASEP can work with population-level data. So, if I have some data with an abnormal background, for example, from crosses between homozygous parents in mice, with three replicates in both treatment and control groups, would ASEP still be applicable?
Regrads.
Zhang