Jiaxin-Fan / MuSiC2

cell type deconvolution for multi-condition bulk RNA-seq data
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spent 5 hours on the music2_prop_t_statistics() step but still not finished #8

Open ynpan910 opened 1 year ago

ynpan910 commented 1 year ago

Hello,

My bulk RNA seq data are from mice with two genotypes. The reference single cell RNA seq data I used has 12 cell types.

The music2_prop_t_statistics() step in MuSic2 1.0.0 did not show errors but just seemed to take forever to finish. Not sure what problem it is. My laptop is core i7, RAM 16GB. Just want to know how much time did it take for you guys to finish it?

Many thanks!