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JiekaiLab / scTE

MIT License
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limit of 10000 cells? #18

Closed 99fatimagr closed 3 years ago

99fatimagr commented 3 years ago

Hi, I'm trying to analyze single cell data and I expect more than 10,000 cells per sample. However, for these samples, they each say 10,000 cells detected in the output. Is there a cutoff at 10,000 or a way to get around this? Thank you.

jphe commented 3 years ago

You can change the expected cells with --expect-cells option with scTE, default: 10000