JiekaiLab / scTE

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Suggestion - more inclusive tags for barcodes #59

Open CHoeltermann opened 1 year ago

CHoeltermann commented 1 year ago

Suggestion:

Instead of accepting only CR:Z, CB:Z as barcode and UR:Z, UB:Z as UMI tags, it would be much more convenient if other, user specified tags could be used. Having to edit the BAM files to suit these specific requirements is not very straightforward.

Please consider allowing Samtools standard tags: github.com/samtools/hts-specs

Thanks!

jphe commented 11 months ago

Thank you for your suggestion. It is a very good suggestion, and I will definitely consider it in the updated version.