unhandled attribute warning in BEAST for file generated in BEAUTI

[GoogleCodeExporter]

What steps will reproduce the problem?
1. In beauti, specify Tree Prior: Speciation Yule Process,
2. Specify an Initial Value for prior treeModel.rootHeight in BEAUTI
3. generate xml file, and run beast

What is the expected output? What do you see instead?
I expect to see no warnings(?), instead I see (when I run BEAST):

WARNING: unhandled attribute (typo?) rootHeight in coalescentTree:startingTree

What version of the product are you using? On what operating system?
v.1.4.8
Linux Ubuntu 7.10 64bit

Please provide any additional information below.
In xml file generated by beauti v.1.4.8 (by using the "Prior for Parameter"
for treeModel.rootHeight, and specifying Initial Value: 83.5):

[...]
<!-- Generate a random starting tree under the coalescent process         
  -->
<coalescentTree id="startingTree" rootHeight="83.5">
[...]

When running beast v.1.4.8

[...]
WARNING: unhandled attribute (typo?) rootHeight in coalescentTree:startingTree
[...]

To me, this looks as if beauti writes "unallowed" code, alt. beast cannot
handle this particular attribute for some reason. Alternatively, beauti
allows user induced "errors", such as specifying values where they
shouldn't be?

Cheers
Johan

Original issue reported on code.google.com by j.a.a.ny...@gmail.com on 4 Aug 2008 at 11:31

[GoogleCodeExporter]

I do not get a warning with the development version. If the file gives a 
warning with
the development version please attach it here.

Original comment by jhe...@gmail.com on 31 Oct 2008 at 4:09

[GoogleCodeExporter]

Can not replicate in BEAST 1.5.2

Original comment by dong.w.xie@gmail.com on 18 Oct 2009 at 9:46

• Changed state: Invalid
• Added labels: BEAST1.5.2