I would expect that to maximise performance you should add diode rf switches inside each filter segment, that short the unused ones to ground.
If you consider a filter board that uses relays, the NC contact at both end of each filter does this.
Otherwise your high frequency filter will bypass the LF one due to track/pad/switch crosstalk.
Given that the switch R is 5 ohms, it is likely to be better to just use a single switch at each end instead of paralleling them up. In that case there would be a couple of options for the unused muxes:
use the unused muxes to decode and drive the diodes, thus eliminating the need for extra control lines
If you wanted to minimise the BOM and not add diodes, then the 2 extra muxes could be grounding two of the three unused filters
I would expect that to maximise performance you should add diode rf switches inside each filter segment, that short the unused ones to ground. If you consider a filter board that uses relays, the NC contact at both end of each filter does this. Otherwise your high frequency filter will bypass the LF one due to track/pad/switch crosstalk.